Third-generation metagenomic sequencing refers to the process of assembling the genome of the core bacterial community by using the third-generation single-molecule real-time sequencing technology of PacBio to study the genome of the microbial community in a specific environment, which, based on the analysis of microbial diversity, population structure, and evolutionary relationship, can further explore the relationship between microbial community functional activity, mutual cooperation and the environment, and explore the potential biological significance. Compared with the second-generation sequencing method, the long-read length of the third-generation metagenome using PacBio SMRT sequencing can reduce partial assembly errors and effectively improve the resolution of microbial community identification.
Brief
Fields
- The field of human microecology
- The field of animal nutrition, immunity and therapy
- The field of environmental fields such as soil, activated sludge, and wastewater
- Plant fields such as rhizosphere microecology
Process
Parameters
Product Type | Sequencing Strategy | Recommended Data Amount | Cycle |
Third-generation Metagenomic Sequencing | 10kb HiFi DNA library | ≥50G | 50 days |
Slide left and right to see more》
Requirements
Sampling Requirements | |
Sample Delivery Volume | Faeces (3-5g ); Soil ( ≥10g ) |
Total DNA | ≥5μg |
DNA Concentration | ≥60ng/μl |
DNA Purity | OD260/280: 1.8-2.0; OD260/230: 1.6-2.5; NC/QC: 0.5-4.0 |
Other Requirements | No RNA contamination, no color in DNA samples, no degradation in the main band concentration, no stickiness, and no stray bands |
Slide left and right to see more》